PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_75297.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 199aa    MW: 21126.8 Da    PI: 10.4561
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_75297.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM142.42.7e-44241611127
           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkevl 93 
                   lp+GfrF+Ptdeelv +yLk+k++g+ ++   +i++vd+  vePwdLp +  +k+++ ew+fF++rd+ +   +++r+ r+t++gyWkatgkd+ + 
  MLOC_75297.2  24 LPVGFRFRPTDEELVRHYLKAKIAGRAHPDLLAIPDVDLAAVEPWDLPaRsVIKSDDPEWFFFARRDRPKYpgKSSRSCRSTAAGYWKATGKDRLIR 120
                   79*************************999899***************5347777888********9855435678999*****************9 PP

           NAM  94 sk.......kgelvglkktLvfykgrapkgektdWvmheyr 127
                            kg+l+g+kktLvf++grap+g +t W+mhey+
  MLOC_75297.2 121 GPgpggcrgKGALIGVKKTLVFHRGRAPRGARTPWIMHEYT 161
                   9999999888889***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.26E-4715167IPR003441NAC domain
PROSITE profilePS5100548.54824198IPR003441NAC domain
PfamPF023652.8E-2625161IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MTTTAAAAGA ESSSSSASPS EAALPVGFRF RPTDEELVRH YLKAKIAGRA HPDLLAIPDV  60
DLAAVEPWDL PARSVIKSDD PEWFFFARRD RPKYPGKSSR SCRSTAAGYW KATGKDRLIR  120
GPGPGGCRGK GALIGVKKTL VFHRGRAPRG ARTPWIMHEY TAVSADNPVH HSGSQSASAS  180
ASASAAGPQN VTCLLAFQS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-352016011138Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228157.15e-76PREDICTED: protein NTM1-like 9
SwissprotF4JN351e-56NTL9_ARATH; Protein NTM1-like 9
TrEMBLM0Z1461e-143M0Z146_HORVD; Uncharacterized protein
STRINGMLOC_75297.21e-143(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP134132529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.21e-54NAC transcription factor-like 9